. The NLR family caspase recruitment domain-containing protein 4 (NLRC4) inflammasome regulates the inflammatory response. against a Uniprot S . The San Diego PDB API is not as good and is documented in XML and in this case it is less good, but sometimes it is. Database cross-references and differences (RAF-indexed): Uniprot P11209 (Start-51) Chain 'B': Compound: fusion protein (f) Species: Human respiratory syncytial virus [TaxId:11261] The ET pathways were investigated using structural information, electrostatic interactions between the electrode and the enzyme, and the differences in the substrates. It also supports post-mortem debugging and can be . all protein sequences encoded by a same gene are merged into a single UniProtKB/Swiss-Prot entry. The asymmetric unit (ASU) of the crystal contains an AtWRKY18-DBD homodimer ().Both protein chains have excellent electron density and could be modeled with confidence except one or two N-terminal residues in chain A and B, respectively. It supports setting (conditional) breakpoints and single stepping at the source line level, inspection of stack frames, source code listing, and evaluation of arbitrary Python code in the context of any stack frame. Search Databases with FASTA: This page provides searches against comprehensive databases, like SwissProt and NCBI RefSeq.The PIR1 Annotated database can be used for small, demonstration searches. Source organism: Homo sapiens. The SIFTS website has all the data in CSV files. DsNewPHL was digested with immo- bidopsis thaliana and SynCry from Synechocystis (Uniprot bilized pepsin at 12 C in water +0.1% (v/v) formic acid ID: P77967) and the class I CPD photolyases SynCPDI at a flow rate of 100 ␮l/min and the resulting peptides (Uniprot ID: P05327) and EcCPDI from E. coli (Uniprot trapped on a C18 column at 0.5 C. Structural data. A const is a compile-time constant whereas readonly allows a value to be calculated at run-time and set in the constructor or field initializer. DOI: 10.2210/pdb4cim/pdb. The human pim-1 (PDB id: 1XWS) showed a sequence similarity of 96% . UniProt - Wikipedia For nucleotide databases we recommend that you use the EBI BLAST service or the NCBI BLAST service . PDB file PDB header PDB file (gz) PDBML PDBML (ATOM lines) PDBML (no atoms) Structure Factors EDS map EDS difference map Assembly composition XML Assembly 1 (mmCIF; gz) Assembly 2 (mmCIF; gz) Assembly 1 (atom . database: database:(type:pfam) database:(type:pdb 1aut) Lists all entries with: a cross-reference to the Pfam database wwPDB: Processing Procedures and Policies - Protein Data Bank (PDF) A topologically distinct class of photolyases specific for UV ... UniProtKB/TrEMBL (often referred to using its pre-UniProt name: TrEMBL) is the unreviewed section of UniProtKB.These are protein sequences harvested from the coding sequence (CDS) features of entries in the ENA EMBL-Bank database (part of the International Nucleotide Sequence Database Collaboration, along with GenBank and DDBJ).The name TrEMBL refers to this source, being an abbreviation of . The image on the left illustrates the results of flexible docking (green . Primary publication: Structural and kinetic study of differences between human and Escherichia coli manganese superoxide dismutases. Unobserved residues and N- or C-terminal tags for the polypeptide chains in the PDB entry are also annotated. UniProt is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects.It contains a large amount of information about the biological function of proteins derived from the research literature.